org.genepattern.io.expr.stanford
Class StanfordTxtWriter
java.lang.Object
 org.genepattern.io.expr.stanford.StanfordTxtWriter
- All Implemented Interfaces:
- IExpressionDataWriter
- public class StanfordTxtWriter
- extends java.lang.Object
- implements IExpressionDataWriter
Writes Stanford txt files.
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Method Summary |
java.lang.String |
checkFileExtension(java.lang.String filename)
Appends the correct file extension to the pathname if it does not exist. |
java.lang.String |
getFormatName()
Returns a String identifying the format that this writer encodes. |
void |
write(IExpressionData expressionData,
java.io.OutputStream os)
Writes an IExpressionData instance to a stream. |
| Methods inherited from class java.lang.Object |
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
StanfordTxtWriter
public StanfordTxtWriter()
checkFileExtension
public java.lang.String checkFileExtension(java.lang.String filename)
- Description copied from interface:
IExpressionDataWriter
- Appends the correct file extension to the pathname if it does not exist.
- Specified by:
checkFileExtension in interface IExpressionDataWriter
- Parameters:
filename - a pathname string
- Returns:
- The corrected pathname
write
public void write(IExpressionData expressionData,
java.io.OutputStream os)
throws java.io.IOException
- Description copied from interface:
IExpressionDataWriter
- Writes an
IExpressionData instance to a stream.
- Specified by:
write in interface IExpressionDataWriter
- Parameters:
expressionData - the dataos - the output stream
- Throws:
java.io.IOException - if an I/O error occurs during writing.
getFormatName
public java.lang.String getFormatName()
- Description copied from interface:
IExpressionDataWriter
- Returns a String identifying the format that this writer encodes.
- Specified by:
getFormatName in interface IExpressionDataWriter
- Returns:
- the format name, as a String.
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