IExpressionDataHandler

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org.genepattern.io.expr
Interface IExpressionDataHandler

All Known Subinterfaces:: IExpressionDataCreator

All Known Implementing Classes:: ExpressionDataCreator

public interface IExpressionDataHandler

An interface for receiving notification of the content of a expression data document

Method Summary

void call(int i, int j, int call)


void columnDescription(int j, java.lang.String desc)


void columnName(int j, java.lang.String name)


void data(int i, int j, double d)


void init(int rows, int cols, boolean hasRowDescriptions, boolean hasColumnDescriptions, boolean hasCalls)


void rowDescription(int i, java.lang.String desc)


void rowName(int i, java.lang.String name)

Method Detail

init

public void init(int rows,
                 int cols,
                 boolean hasRowDescriptions,
                 boolean hasColumnDescriptions,
                 boolean hasCalls)
          throws ParseException

Throws:: ParseException

data

public void data(int i,
                 int j,
                 double d)
          throws ParseException

Throws:: ParseException

call

public void call(int i,
                 int j,
                 int call)
          throws ParseException

Throws:: ParseException

columnName

public void columnName(int j,
                       java.lang.String name)
                throws ParseException

Throws:: ParseException

rowName

public void rowName(int i,
                    java.lang.String name)
             throws ParseException

Throws:: ParseException

rowDescription

public void rowDescription(int i,
                           java.lang.String desc)
                    throws ParseException

Throws:: ParseException

columnDescription

public void columnDescription(int j,
                              java.lang.String desc)
                       throws ParseException

Throws:: ParseException