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Constant Field Values

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org.genepattern.*

org.genepattern.data.expr.IResExpressionData
public static final int ABSENT 0
public static final int MARGINAL 2
public static final int PRESENT 1

org.genepattern.data.pipeline.PipelineModel
public static final java.lang.String DESC "_description"
public static final java.lang.String INHERIT_FILENAME "inheritFilename"
public static final java.lang.String INHERIT_TASKNAME "inheritTaskname"
public static final java.lang.String PIPELINE_MODEL "serializedModel"
public static final java.lang.String RUNTIME_PARAM "runTimePrompt"

org.genepattern.util.IGPConstants
public static final int ACCESS_PRIVATE 2
public static final int ACCESS_PUBLIC 1
public static final java.lang.String ANT "ant"
public static final java.lang.String ANY "any"
public static final java.lang.String AUTHOR "author"
public static final java.lang.String COMMAND_LINE "commandLine"
public static final java.lang.String COMMAND_PREFIX "commandPrefix"
public static final java.lang.String CPU_TYPE "cpuType"
public static final java.lang.String DEFAULT_PATCH_REPOSITORY_URL "DefaultPatchRepositoryURL"
public static final java.lang.String DEFAULT_PATCH_URL "DefaultPatchURL"
public static final java.lang.String DESCRIPTION "description"
public static final java.lang.String DOMAIN "domain"
public static final java.lang.String FILE_FORMAT "fileFormat"
public static final java.lang.String FORMER_NAME "formerName"
public static final java.lang.String INPUT_BASENAME "_basename"
public static final java.lang.String INPUT_EXTENSION "_extension"
public static final java.lang.String INPUT_FILE "_file"
public static final java.lang.String INPUT_PATH "_path"
public static final java.lang.String INSTALLED_PATCH_LSIDS "installedPatchLSIDs"
public static final java.lang.String INVOKE "Invoke"
public static final java.lang.String JAVA "java"
public static final java.lang.String JOB_ID "job_id"
public static final java.lang.String JVM_LEVEL "JVMLevel"
public static final java.lang.String LANGUAGE "language"
public static final java.lang.String LEFT_DELIMITER "<"
public static final java.lang.String LIBDIR "libdir"
public static final java.lang.String LSID "LSID"
public static final java.lang.String LSID_PROVENANCE "LSID_PROVENANCE"
public static final java.lang.String MANIFEST_FILENAME "manifest"
public static final int MAX_PARAMETERS 20
public static final java.lang.String MULTIPLE "multiple"
public static final java.lang.String NAME "name"
public static final java.lang.String ODF "ODF"
public static final java.lang.String OS "os"
public static final java.lang.String PARAM_INFO_CHECKBOX "checkbox"
public static final java.lang.String PARAM_INFO_CHOICE "choice"
public static final java.lang.String PARAM_INFO_CHOICE_DELIMITER ";"
public static final int PARAM_INFO_CHOICE_TYPES_MULTIPLE_OFFSET 3
public static final int PARAM_INFO_CHOICE_TYPES_OFFSET 2
public static final int PARAM_INFO_NAME_OFFSET 0
public static final char PARAM_INFO_SPACER 95
public static final java.lang.String PARAM_INFO_STRING "string"
public static final int PARAM_INFO_TYPE_CLASS_OFFSET 1
public static final java.lang.String PARAM_INFO_TYPE_FLOAT "java.lang.Float"
public static final java.lang.String PARAM_INFO_TYPE_INPUT_FILE "java.io.File"
public static final java.lang.String PARAM_INFO_TYPE_INTEGER "java.lang.Integer"
public static final int PARAM_INFO_TYPE_NAME_OFFSET 0
public static final int PARAM_INFO_TYPE_OFFSET 1
public static final java.lang.String PARAM_INFO_TYPE_SEPARATOR "="
public static final java.lang.String PARAM_INFO_TYPE_TEXT "java.lang.String"
public static final java.lang.String PATCH_ERROR_EXIT_VALUE "failureExitValue"
public static final java.lang.String PATCH_SUCCESS_EXIT_VALUE "successExitValue"
public static final java.lang.String PERL "perl"
public static final java.lang.String PIPELINE_SCRIPT "pipelineModel"
public static final java.lang.String PREFIX "prefix"
public static final java.lang.String PRIVACY "privacy"
public static final java.lang.String PRIVATE "private"
public static final java.lang.String PUBLIC "public"
public static final java.lang.String QUALITY "quality"
public static final java.lang.String QUALITY_DEVELOPMENT "development"
public static final java.lang.String QUALITY_PREPRODUCTION "preproduction"
public static final java.lang.String QUALITY_PRODUCTION "production"
public static final java.lang.String R "R"
public static final java.lang.String R_HOME "R_HOME"
public static final java.lang.String REQUIRED_PATCH_LSIDS "requiredPatchLSIDs"
public static final java.lang.String REQUIRED_PATCH_URLS "requiredPatchURLs"
public static final java.lang.String RIGHT_DELIMITER ">"
public static final java.lang.String SERIALIZED_MODEL "serializedModel"
public static final java.lang.String STDERR "stderr.txt"
public static final java.lang.String STDOUT "stdout.txt"
public static final java.lang.String SUITE_MANIFEST_FILENAME "suiteManifest.xml"
public static final java.lang.String SUITE_NAMESPACE "genepatternsuites"
public static final java.lang.String TASK_ID "task_id"
public static final java.lang.String TASK_NAMESPACE "genepatternmodules"
public static final java.lang.String TASK_TYPE "taskType"
public static final java.lang.String TASK_TYPE_PIPELINE "pipeline"
public static final java.lang.String TASK_TYPE_VISUALIZER "Visualizer"
public static final java.lang.String TASKLOG "gp_task_execution_log.txt"
public static final java.lang.String TOMCAT "tomcat"
public static final java.lang.String USER_LOGGED_OFF "userLoggedOff"
public static final java.lang.String USERID "userid"
public static final java.lang.String UTF8 "UTF-8"
public static final java.lang.String VERSION "version"

org.genepattern.util.LSID
public static final java.lang.String DELIMITER ":"
public static final java.lang.String SCHEME "lsid"
public static final java.lang.String URN "urn"
public static final java.lang.String VERSION_DELIMITER "."

org.genepattern.webservice.OmnigeneErrorCode
public static final int E_OMNIBUS_BUSY 20000
public static final int E_OMNIBUS_FATAL_ERROR 20001
public static final int E_OMNIBUS_UNRECOGNIZED_VERSION 20002
public static final int E_PROPERTY_NOT_FOUND 60000
public static final int E_SERVER_NOT_STARTED 60001

org.genepattern.webservice.ParameterInfo
public static final java.lang.String CACHED_INPUT_MODE "CACHED_IN"
public static final java.lang.String FILE_TYPE "FILE"
public static final java.lang.String INPUT_MODE "IN"
public static final java.lang.String MODE "MODE"
public static final java.lang.String OUTPUT_MODE "OUT"
public static final java.lang.String TYPE "TYPE"
public static final java.lang.String URL_INPUT_MODE "URL_IN"

org.genepattern.webservice.TaskExecutor
public static final java.lang.String ANY "any"
public static final java.lang.String leftDelimiter "<"
public static final java.lang.String PARAM_INFO_CHECKBOX "checkbox"
public static final java.lang.String PARAM_INFO_STRING "string"
public static final java.lang.String rightDelimiter ">"

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